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BPSS0780 BPSS0780 BPSS0781 BPSS0781 BPSS0779 BPSS0779 gabT gabT BPSS0782 BPSS0782 BPSS0339 BPSS0339 acoE acoE BPSL2229 BPSL2229 BPSS1269 BPSS1269 BPSS1008 BPSS1008 cyoB-2 cyoB-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
BPSS0780Similar to Pseudomonas sp. salicylaldehyde dehydrogenase NahF or DoxF SWALL:NAHF_PSESP (SWALL:Q52460) (483 aa) fasta scores: E(): 5.7e-79, 47.59% id in 479 aa, and to Pseudomonas fluorescens vanillin: NAD+ oxidoreductase Vdh SWALL:O69763 (EMBL:Y13067) (482 aa) fasta scores: E(): 2.8e-113, 67.14% id in 484 aa. Similar to BPSL0843, 64.694% identity (64.959% ungapped) in 490 aa overlap. (482 aa)    
Predicted Functional Partners:
BPSS0781
Putative AMP-binding enzyme; Similar to Pseudomonas sp. feruloyl-CoA synthetase Fcs SWALL:Q9RLD9 (EMBL:AJ238746) (589 aa) fasta scores: E(): 2.2e-129, 61.28% id in 576 aa. N-terminal region is similar to the N-terminal region of Escherichia coli long-chain-fatty-acid--CoA ligase FadD or OldD SWALL:LCFA_ECOLI (SWALL:P29212) (561 aa) fasta scores: E(): 2.2e-09, 25.38% id in 524 aa. CDS is extended at the N-terminus in comparison to Pseudomonas sp. protein.
 
 
 0.821
BPSS0779
enoyl-CoA hydratase/isomerase family protein; Similar to Pseudomonas fluorescens p-hydroxycinnamoyl CoA hydratase/lyase SWALL:O69762 (EMBL:Y13067) (276 aa) fasta scores: E(): 4.9e-91, 82.84% id in 274 aa, and to Ralstonia solanacearum probable ferulic acid hydratase protein rsp0225 or rs05198 SWALL:Q8XT90 (EMBL:AL646077) (277 aa) fasta scores: E(): 2.9e-90, 80.65% id in 274 aa; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.616
gabT
Similar to Escherichia coli 4-aminobutyrate aminotransferase GabT or b2662 SWALL:GABT_ECOLI (SWALL:P22256) (426 aa) fasta scores: E(): 4.8e-79, 54.24% id in 424 aa, and to Ralstonia solanacearum probable 4-aminobutyrate aminotransferase protein rsc0029 or rs01852 SWALL:Q8Y3F1 (EMBL:AL646057) (426 aa) fasta scores: E(): 1.5e-108, 71.29% id in 418 aa; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.509
BPSS0782
Putative sugar transport protein; Similar to Pseudomonas putida 4-hydroxybenzoate transporter PcaK SWALL:PCAK_PSEPU (SWALL:Q51955) (448 aa) fasta scores: E(): 3.4e-17, 35.75% id in 400 aa, and to Pseudomonas fluorescens hypothetical metabolite transport protein SWALL:O69757 (EMBL:L49465) (405 aa) fasta scores: E(): 1.7e-60, 48.72% id in 392 aa.
 
     0.503
BPSS0339
Putative amino acid dioxygenase; Similar to Pseudomonas putida 4-hydroxyphenylpyruvate dioxygenase, putative pp2554 SWALL:AAN68163 (EMBL:AE016783) (635 aa) fasta scores: E(): 2.8e-61, 53.44% id in 683 aa. CDS contains region with additional internal amino acids (residues 272 to 338) in comparison to orthologues.
 
  
 0.502
acoE
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.425
BPSL2229
Similar to Pseudomonas putida siderophore non-ribosomal peptide synthetase PpsD SWALL:Q9AKS6 (EMBL:AJ310530) (2246 aa) fasta scores: E(): 4.8e-102, 28.54% id in 2659 aa, and to the C-terminal region of Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 1.5e-94, 27.02% id in 3648 aa.
  
 
 0.419
BPSS1269
Putative peptide synthase/polyketide synthase; Similar to C-terminus of Aphanizomenon ovalisporum peptide synthetase AoaB SWALL:AAM33468 (EMBL:AF395828) (1869 aa) fasta scores: E(): 5.4e-125, 35.68% id in 1841 aa, and to C-terminus of Stigmatella aurantiaca MtaD SWALL:Q9RFK8 (EMBL:AF188287) (3291 aa) fasta scores: E(): 7.3e-124, 29.54% id in 3368 aa.
  
 
 0.419
BPSS1008
Putative polyketide synthase; N-terminal region is similar to the the N-terminal region of Bacillus subtilis putative polyketide synthase PksK SWALL:PKSK_BACSU (SWALL:P40803) (4447 aa) fasta scores: E(): 1.1e-167, 38.79% id in 3439 aa. Internal region is similar to an internal region of Pseudomonas fluorescens MmpIV protein SWALL:Q8RL72 (EMBL:AF318063) (6521 aa) fasta scores: E(): 2.8e-41, 32.83% id in 4069 aa.
  
 
 0.414
cyoB-2
Ubiquinol oxidase polypeptide I; Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ubiquinol oxidase polypeptide I CyoB or b0431 or c0542 or z0534 or ecs0485 SWALL:CYOB_ECOLI (SWALL:P18401) (663 aa) fasta scores: E(): 1.5e-189, 67.22% id in 653 aa, and to Acetobacter aceti ubiquinol oxidase polypeptide I precursor CyaA SWALL:QOX1_ACEAC (SWALL:P98009) (664 aa) fasta scores: E(): 4.4e-197, 69.06% id in 666 aa; Belongs to the heme-copper respiratory oxidase family.
   
  
 0.410
Your Current Organism:
Burkholderia pseudomallei
NCBI taxonomy Id: 272560
Other names: B. pseudomallei K96243, Burkholderia pseudomallei K96243, Burkholderia pseudomallei str. K96243, Burkholderia pseudomallei strain K96243
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